PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0061.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

WOX

Protein Properties

Length: 404aa MW: 44507.5 Da PI: 7.4997

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0061.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.2e-18	52	112	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ Kaladp0067s0061.1.p 52 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 112 89***************99***********************************995 PP
2	Wus_type_Homeobox	111.7	3.9e-36	51	113	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k Kaladp0067s0061.1.p 51 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 113 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MASSNRHWPS MFKSKPCNPH HQWQHDLNSS LLSGCHRNPY TSGVEERSPE PKPRWNPKPE 60 QIRILEAIFN SGMVNPPRDE IRKIRAQLQE YGQVGDANVF YWFQNRKSRS KHKNRQPPKS 120 QQNQSNPSAT ARAPHQSIPT TTPATAAPSL MTNPSSSSSS SSDKSPPKLN PNKTTNSPTC 180 FSLGSSSSNL LDQLAYNSPT TSVNQNYDHF VQHDQPFMFP LQHLNFTSQG FTGFPDQHTP 240 HQQMMMTDSN NLINNNISHS VGPCTEFLFS ELISSQHGVG ISDPKKDAED EEKLMMMKLG 300 YATAPSATSP TNNVPASAAT VLPLPSTLNQ LQDESGGSAV VGPMKSTVFI NDVAFEVNCG 360 PFHVREAFGN DAVLLHSTGQ PVLTNEWGVT LQPLQHGAFY YLI*

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MASSNRHWPS MFKSKPCNPH HQWQHDLNSS LLSGCHRNPY TSGVEERSPE PKPRWNPKPE  60
QIRILEAIFN SGMVNPPRDE IRKIRAQLQE YGQVGDANVF YWFQNRKSRS KHKNRQPPKS  120
QQNQSNPSAT ARAPHQSIPT TTPATAAPSL MTNPSSSSSS SSDKSPPKLN PNKTTNSPTC  180
FSLGSSSSNL LDQLAYNSPT TSVNQNYDHF VQHDQPFMFP LQHLNFTSQG FTGFPDQHTP  240
HQQMMMTDSN NLINNNISHS VGPCTEFLFS ELISSQHGVG ISDPKKDAED EEKLMMMKLG  300
YATAPSATSP TNNVPASAAT VLPLPSTLNQ LQDESGGSAV VGPMKSTVFI NDVAFEVNCG  360
PFHVREAFGN DAVLLHSTGQ PVLTNEWGVT LQPLQHGAFY YLI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	3e-61	WOX family protein