PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0079.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 244aa    MW: 26042.9 Da    PI: 9.0434
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0079.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-1262109354
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++h+ +ErrRR+riN  +++Lr l+P+     s K++Ka+iL +++  ++ L
  Kaladp0067s0079.1.p  62 KNHSDAERRRRERINAHLATLRGLVPST----SDKMDKAAILAEVITQVRRL 109
                          58*************************9....8**********999776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MEFQITCGSG FGGGFDQFLL QGYCDQSSKA LVLDCERGEL VKAAGVLGKK GVSPAKSAEA  60
LKNHSDAERR RRERINAHLA TLRGLVPSTS DKMDKAAILA EVITQVRRLK KKAAEAAAGL  120
LIPLDADEVR VQAVEDQAGE GTTLCFKASI CCGYRPDLLP DLKLALSTLQ VSTQQMEMST  180
LGGRVKNEFV FSALRDGKLA KADEEKAIAA SIHGALSSVL DKAPPLQPYS PQTASQNKKR  240
KLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16873ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-30bHLH family protein