PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0129.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BBR-BPC
Protein Properties Length: 304aa    MW: 33871.8 Da    PI: 10.6895
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0129.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind300.94.8e-92630330301
            GAGA_bind  30 ssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvg..vqvlsgtksidslqq 113
                          ++++er++++rern+a++e k+a+a+rdma l+rd+a+++r++a ++rd+++++l+l+++s++     ++p++  ++v+ g+k++++ qq
  Kaladp0067s0129.1.p   6 AILSERNEAMRERNMAIAEIKQAIAQRDMAILERDAAVTDRDHARMQRDDAIAQLQLKTDSMNtsivIHNPSEsaMSVSLGAKQMQMQQQ 95 
                          6789*****************************************************999998888855665411455667788777776 PP

            GAGA_bind 114 lse.......pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader.......... 186
                          +++       p+ ++ a++ re   ++++p ++a ++a+++k+ k+ +++k+   +ka k+ +k +k++ +v+      +          
  Kaladp0067s0129.1.p  96 QQQqqrrqhlPNYSEVAFNPREVPFSDVFPQSTAGSKATRAKRGKHAKEKKTVSPNKALKPARKIAKKRTRVS------Nkqltatshhs 179
                          5553444444444455555555555555555554444444444333333333333333333333333333333......13344556778 PP

            GAGA_bind 187 .........skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkk 267
                                    k+   + +l+ln+  lD+ +lPvP CsCtG+++ CYkWG GGWqSaCCtt++S+yPLP+++++r++R++grKmS+gaf+k
  Kaladp0067s0129.1.p 180 sdsgrsgnlEKQIVLKGGLSLNELGLDDVNLPVPFCSCTGKPQSCYKWGKGGWQSACCTTALSMYPLPQMPNKRHSRMGGRKMSGGAFTK 269
                          8999988877777777899*********************************************************************** PP

            GAGA_bind 268 lLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                          l+ +La+eGyd+  p+DLk++WAkHGtn+++tir
  Kaladp0067s0129.1.p 270 LITRLASEGYDITVPIDLKTYWAKHGTNRYITIR 303
                          *********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDPFFAILSE RNEAMRERNM AIAEIKQAIA QRDMAILERD AAVTDRDHAR MQRDDAIAQL  60
QLKTDSMNTS IVIHNPSESA MSVSLGAKQM QMQQQQQQQQ RRQHLPNYSE VAFNPREVPF  120
SDVFPQSTAG SKATRAKRGK HAKEKKTVSP NKALKPARKI AKKRTRVSNK QLTATSHHSS  180
DSGRSGNLEK QIVLKGGLSL NELGLDDVNL PVPFCSCTGK PQSCYKWGKG GWQSACCTTA  240
LSMYPLPQMP NKRHSRMGGR KMSGGAFTKL ITRLASEGYD ITVPIDLKTY WAKHGTNRYI  300
TIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-79BBR-BPC family protein