PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0141.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 429aa    MW: 48011.1 Da    PI: 6.1933
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0141.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2906.5e-89434223374
                 GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                          +lL++cA+a+s++d +++++lL+ l+elasp+gd  q+la++f++ L  + ++s+++ y++l + ++++++ +++ +    f+evsP+ +
  Kaladp0067s0141.1.p  43 RLLMDCARAISQKDSSKIHHLLWMLNELASPYGDCEQKLASCFLQVLFCKATESGQRSYRTLMSVAAKTYSFDSARKLILKFQEVSPWTT 132
                          79************************************************************9999997776666666666********* PP

                 GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl 181
                          f+h++ N  Ilea++ge+++HiiD++ + ++QWp+Ll+aLa+R+ +++p+l++T+v+  ++  k  ++ + +r++kfA+ +gvpfef+++
  Kaladp0067s0141.1.p 133 FGHVASNGSILEALDGESKLHIIDMSNTLCTQWPTLLEALATRNaQETPHLKLTVVVT-DKMVKPVMKDVSQRMEKFARLMGVPFEFKAI 221
                          ********************************************8899*********9.6789**************************9 PP

                 GRAS 182 .vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalf 268
                             + l +l+ ++L +k gEa+aVn+  +l r       + + r ++++++ sl+Pkvv++ve+ead   ++++F++ f e+l+++   f
  Kaladp0067s0141.1.p 222 tELNCLGELTKDQLGIKDGEAVAVNCNGALRRAD-----VGK-RGSLIDMIGSLQPKVVTIVEEEADFtsTRGDFVKCFEECLNFFILYF 305
                          4455999***********************9996.....333.778*******************999545669**************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegae....rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.. 352
                          ++le+++ ++s+er ++Ere  +r+iv +++c  +     + er+e+ ++W++rl+ a + p+++s+++++++k+ll+++   g++++  
  Kaladp0067s0141.1.p 306 ETLEESFIPTSNERLMLERE-CSRHIVGILSCDDEIddhgQCERRERGAQWSKRLR-ASLAPITFSDDVTDDVKALLKRYR-TGWNLKvs 392
                          ********************.89*********8653223478************96.67**********************.55555533 PP

                 GRAS 353 ee........sgslvlgWkdrpLvsvSaWr 374
                          ++         + ++l Wk++pLv++SaW+
  Kaladp0067s0141.1.p 393 QKssdvdetsPAGIYLLWKEQPLVWASAWK 422
                          334555555345566**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MLLDTTLAGG LQSLAMQNNN GQLPGRSLEF SIEPCDTGKW AARLLMDCAR AISQKDSSKI  60
HHLLWMLNEL ASPYGDCEQK LASCFLQVLF CKATESGQRS YRTLMSVAAK TYSFDSARKL  120
ILKFQEVSPW TTFGHVASNG SILEALDGES KLHIIDMSNT LCTQWPTLLE ALATRNAQET  180
PHLKLTVVVT DKMVKPVMKD VSQRMEKFAR LMGVPFEFKA ITELNCLGEL TKDQLGIKDG  240
EAVAVNCNGA LRRADVGKRG SLIDMIGSLQ PKVVTIVEEE ADFTSTRGDF VKCFEECLNF  300
FILYFETLEE SFIPTSNERL MLERECSRHI VGILSCDDEI DDHGQCERRE RGAQWSKRLR  360
ASLAPITFSD DVTDDVKALL KRYRTGWNLK VSQKSSDVDE TSPAGIYLLW KEQPLVWASA  420
WKSQPAKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-133GRAS family protein