PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0150.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27435.4 Da    PI: 7.643
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0150.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF87.19.7e-28959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         +ri+n++ rqvtfskRr+g+lKKA+ELS+LCd++v v+ifsstgkly+++s
  Kaladp0067s0150.4.p  9 ERIDNTTSRQVTFSKRRKGLLKKAKELSILCDVQVGVMIFSSTGKLYDFAS 59
                         69***********************************************86 PP
2K-box81.81.5e-2781170897
                K-box   8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                          ++++++ + +++e+a L+ ++++Lq+ +R++ Ge+L+sL+++eLq+Le+qLe  lk iR kK+e+++++ieel kke+ +q+en +Lr++
  Kaladp0067s0150.4.p  81 ENSNSEVKFWKNEAATLQHQLQSLQEDHRKVFGEELSSLTIQELQHLENQLEMNLKCIRMKKDEIMVAEIEELHKKERLIQQENLDLRNQ 170
                          3788999********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGKIVIER IDNTTSRQVT FSKRRKGLLK KAKELSILCD VQVGVMIFSS TGKLYDFASN  60
ASIKSTIEQY NKLKGNQLHL ENSNSEVKFW KNEAATLQHQ LQSLQEDHRK VFGEELSSLT  120
IQELQHLENQ LEMNLKCIRM KKDEIMVAEI EELHKKERLI QQENLDLRNQ AVCYIKNTEV  180
HSAQAPSRVK AAPLHTRELC WEDDTLEHVQ LQLSQPQPQP QPQGSELSPG NIMMGLHLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.11e-72MIKC_MADS family protein