PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0152.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 242aa MW: 27388.7 Da PI: 9.8212

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0152.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.6	7e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+ rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s Kaladp0067s0152.1.p 9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59 79***********************************************86 PP
2	K-box	74.9	2.2e-25	86	175	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + +++e+a L++++++Lq+ +R++ e+L sL++keLq+Le+qLe lk iR kK+e+++++i+el++k +q+en +L+++ Kaladp0067s0152.1.p 86 EVKSTLQFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKDEIMMAKIDELRQKGSLIQQENLDLHNQA 175 456779********************************************************************************9885 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK 60 ASIKATIEEY NKLKGDQLHP ANPSSEVKST LQFWKNEVAT LQQQLQSLQE DHRKVFTEEL 120 ASLTIKELQH LENQLEMNLK CIRMKKDEIM MAKIDELRQK GSLIQQENLD LHNQAMCHIK 180 NIQVHDMRAP NVVKAAPLRM DNVCGENGTP VHVQLQLRQP QPQPQSTELA SGNVIMGLHL 240 N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	9e-71	MIKC_MADS family protein