PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0152.12.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 184aa    MW: 21049.4 Da    PI: 9.9707
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0152.12.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF88.34.3e-28959151
                          S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                          krien+  rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s
  Kaladp0067s0152.12.p  9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59
                          79***********************************************86 PP
2K-box76.28.6e-2682171998
                 K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                           + +++ + +++e+a L++++++Lq+ +R++  e+L sL++keLq+Le+qLe  lk iR kK+e+++++i+el++k   +q+en +L+++
  Kaladp0067s0152.12.p  82 NPSSEVKFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKDEIMMAKIDELRQKGSLIQQENLDLHNQ 170
                           668899********************************************************************************988 PP

                 K-box  98 l 98 
                            
  Kaladp0067s0152.12.p 171 A 171
                           5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK  60
ASIKATIEEY NKLKGDQLHP ANPSSEVKFW KNEVATLQQQ LQSLQEDHRK VFTEELASLT  120
IKELQHLENQ LEMNLKCIRM KKDEIMMAKI DELRQKGSLI QQENLDLHNQ AMCHIKNIQV  180
HGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.15e-73MIKC_MADS family protein