PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0152.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 205aa MW: 23056.7 Da PI: 10.2362

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0152.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88	5.2e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien+ rqvtfskRr+g+lKKA+ELS+LCda+v v+ifsstgkly+y+s Kaladp0067s0152.3.p 9 KRIENTNSRQVTFSKRRKGLLKKAKELSILCDAQVGVMIFSSTGKLYDYAS 59 79***********************************************86 PP
2	K-box	57.1	7.8e-20	86	150	9	73
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnell 73 +++ + +++e+a L++++++Lq+ +R++ e+L sL++keLq+Le+qLe lk iR kK + + Kaladp0067s0152.3.p 86 EVKSTLQFWKNEVATLQQQLQSLQEDHRKVFTEELASLTIKELQHLENQLEMNLKCIRMKKVHDM 150 456789*******************************************************8766 PP

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence
MGRGKIVIKR IENTNSRQVT FSKRRKGLLK KAKELSILCD AQVGVMIFSS TGKLYDYASK 60 ASIKATIEEY NKLKGDQLHP ANPSSEVKST LQFWKNEVAT LQQQLQSLQE DHRKVFTEEL 120 ASLTIKELQH LENQLEMNLK CIRMKKVHDM RAPNVVKAAP LRMDNVCGEN GTPVHVQLQL 180 RQPQPQPQST ELASGNVIMG LHLN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	3e-59	MIKC_MADS family protein