PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0210.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 684aa MW: 76106.9 Da PI: 5.6917

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0210.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.3	2.5e-52	75	207	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+e+d++++ePwdLp + +k+++ ew+fF++rd+ky++g+r+nrat++gyWkatgk Kaladp0067s0210.1.p 75 LPLGFRFRPTDEELINHYLRLKINGRDSEV-QVIPEIDVCRWEPWDLPdlSVIKTGDPEWFFFCPRDRKYPNGHRSNRATEAGYWKATGK 163 699**********************999.99**********96448888999**************************** PP NAM 89 dkevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++k +++l+g+kktLvfy+grap+ge+t+W+mheyr+ Kaladp0067s0210.1.p 164 DRTIKAKklpaTTNLIGMKKTLVFYRGRAPRGERTHWIMHEYRA 207 **988888888*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 684 aa Download sequence
MMMIKRSTEE RKSKIEKSKS KEIRKRRRRR RRNKVVGKAE SIIARRDYSV SETTSELGFC 60 CWADRIMAIL SVEALPLGFR FRPTDEELIN HYLRLKINGR DSEVQVIPEI DVCRWEPWDL 120 PDLSVIKTGD PEWFFFCPRD RKYPNGHRSN RATEAGYWKA TGKDRTIKAK KLPATTNLIG 180 MKKTLVFYRG RAPRGERTHW IMHEYRATEK DLDGTGPGQG AFVLCRLFKK SDETIDVPNY 240 DEVDNTGSSP ATTRSSPDDT SSDIVQEAGA PERKQPEGIK RWLTDKADKM TDSFAGPVDS 300 CCSNLASDSE DHAVERTAPE THPLVGINPE VYESNNDLLD SHEFDSFGSL IQKDLPYVGS 360 PFASDFGFRY DVFQDSTGEQ DIFLTELLDE VFNDFSCEES ASQKNSAIGS ESYLSDQLCV 420 SPYGQSDAYG IGNGIYGNKD AEMSQLRYDL GVGGPLWSNE SEGGKSNMQI PAYPGYFQAD 480 RSFCGGVHIT SSVELPESAT VLPDKSFRSE ESAGRKTSAN DGAKTGIKIR TRQPQRQPYS 540 DSSQQQGIAP RRIRLQIRNT GNALGETMKN EGETYVEPGI SNDALAIERK ASTTEVEVET 600 SLTASEKKSE RSDLIQEQSS SSLRQRVKQS GEGNTPLVTS QPRQEIAAKN NPGSLKAVFA 660 GVALFTMICL TIVLGVAGWY STQ*

Sequence ? help Back to Top

Protein Sequence Length: 684 aa Download sequence

MMMIKRSTEE RKSKIEKSKS KEIRKRRRRR RRNKVVGKAE SIIARRDYSV SETTSELGFC  60
CWADRIMAIL SVEALPLGFR FRPTDEELIN HYLRLKINGR DSEVQVIPEI DVCRWEPWDL  120
PDLSVIKTGD PEWFFFCPRD RKYPNGHRSN RATEAGYWKA TGKDRTIKAK KLPATTNLIG  180
MKKTLVFYRG RAPRGERTHW IMHEYRATEK DLDGTGPGQG AFVLCRLFKK SDETIDVPNY  240
DEVDNTGSSP ATTRSSPDDT SSDIVQEAGA PERKQPEGIK RWLTDKADKM TDSFAGPVDS  300
CCSNLASDSE DHAVERTAPE THPLVGINPE VYESNNDLLD SHEFDSFGSL IQKDLPYVGS  360
PFASDFGFRY DVFQDSTGEQ DIFLTELLDE VFNDFSCEES ASQKNSAIGS ESYLSDQLCV  420
SPYGQSDAYG IGNGIYGNKD AEMSQLRYDL GVGGPLWSNE SEGGKSNMQI PAYPGYFQAD  480
RSFCGGVHIT SSVELPESAT VLPDKSFRSE ESAGRKTSAN DGAKTGIKIR TRQPQRQPYS  540
DSSQQQGIAP RRIRLQIRNT GNALGETMKN EGETYVEPGI SNDALAIERK ASTTEVEVET  600
SLTASEKKSE RSDLIQEQSS SSLRQRVKQS GEGNTPLVTS QPRQEIAAKN NPGSLKAVFA  660
GVALFTMICL TIVLGVAGWY STQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	28	RKRRR
2	24	30	RKRRRRR
3	24	31	RKRRRRRR
4	24	32	RKRRRRRRR
5	25	30	KRRRRR
6	25	31	RKRRRRR
7	26	32	RKRRRRR
8	26	31	RRRRRR
9	26	32	RRRRRRR
10	27	32	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-121	NAC family protein