PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0067s0313.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 714aa    MW: 77865.4 Da    PI: 6.1725
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0067s0313.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.74.8e-192071556
                         SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         ++++++q+++Le++F++++++++++r +L+++lgL  rq+k+WFqNrR+++k
  Kaladp0067s0313.2.p 20 HRHSAHQIQRLEAVFKECPHLDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 71
                         6799*********************************************998 PP
2START169.91.7e-532284491206
                          HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EE CS
                START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv...dsgealrasgvvdmvlallveellddkeqWdetla....ka 79 
                          e+a  a+++lvk+ +a+ep+W+ks+    + +n++ +l   +++      ++ea+r+sgvv m++ llv  ++d + +W et+     +a
  Kaladp0067s0313.2.p 228 EIAANAMNDLVKLLQATEPLWTKSAtdgrDTLNYENYLMLSPRAMKkpnARTEASRDSGVVAMNSLLLVDMFMDAG-KWLETFSpivsAA 316
                          57889************************999999999887776557889**************************.************* PP

                          EEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEE CS
                START  80 etlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghs 162
                          +t++v++ g      g+l lm+ elq+lsplvp R+fvf+Ry++q ++g+wvivdvS d  + +     +  +++lpSg+lie++sng s
  Kaladp0067s0313.2.p 317 KTIQVLTAGvsgslsGTLRLMYEELQVLSPLVPtREFVFLRYCQQTEKGSWVIVDVSCDFANGNRH--VLPQSRRLPSGCLIEDMSNGIS 404
                          ***************************************************************975..6666777*************** PP

                          EEEEEE-EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                START 163 kvtwvehvdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                          kv wvehv+ ++ +  + l+  l+ksg+a+ga +w+atlqr ce+
  Kaladp0067s0313.2.p 405 KVSWVEHVEIQDDSQaDHLYGDLIKSGYAFGAERWLATLQRMCER 449
                          **********998888***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    
MEQGSAGDDS DPQKRKKRFH RHSAHQIQRL EAVFKECPHL DEKQRLQLSR ELGLAPRQIK  60
FWFQNRRTQM KGQLERADNS ILKAENDKIR CSNIALREAL KNIMCPNCGS MRIGDDPYLD  120
EQQLHLENAH LKEELDRVSS IAAKYIGRPV SQFSTTQSSH ISLIELSLGS FGGQIIPSPS  180
LGGFGSHGIT GSSLELDILS GTSSSVPPTM EIQPGSTIND MDKTLMAEIA ANAMNDLVKL  240
LQATEPLWTK SATDGRDTLN YENYLMLSPR AMKKPNARTE ASRDSGVVAM NSLLLVDMFM  300
DAGKWLETFS PIVSAAKTIQ VLTAGVSGSL SGTLRLMYEE LQVLSPLVPT REFVFLRYCQ  360
QTEKGSWVIV DVSCDFANGN RHVLPQSRRL PSGCLIEDMS NGISKVSWVE HVEIQDDSQA  420
DHLYGDLIKS GYAFGAERWL ATLQRMCERY ASLTVSGTNI HDLDGVIPTF DGKANMMKLS  480
QRMVSNFCAT VSTSTNSQQC TTLAGSNESQ VRLTVRKTAT DPGQPNGLVL CAATSIWLPV  540
SPQNAFNFLR DWDVLSKGGA VQEVAHISCG SHPGNYISIL RASDPSQNNM VILQECCIDS  600
WGSLIVYSPV EIPEINMAVS GGDPSCIPLL PSGFMISPDG RSEIAHLSEA SSTSSSRHSS  660
MTKSSGSLIT IGFQILAGSS PVAKLDMESV TTVNNLIGMT IHQIKAALDC PDS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein