PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0068s0292.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 282aa    MW: 30992.7 Da    PI: 6.2577
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0068s0292.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.8e-18116170256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ ++t+eq  +Le++F+ +++++++++  LAk+l+L  rqV vWFqNrRa+ k
  Kaladp0068s0292.1.p 116 RKKLRLTREQSAVLEDMFRDHNTLNQKQKVALAKQLDLRPRQVEVWFQNRRARTK 170
                          678899***********************************************98 PP
2HD-ZIP_I/II124.16.6e-40116205191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl++eq+++LE++F+ +++L++++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
  Kaladp0068s0292.1.p 116 RKKLRLTREQSAVLEDMFRDHNTLNQKQKVALAKQLDLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLHKEVQELR-A 204
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0068s0292.1.p 205 L 205
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MEGDKEDDGL ELSLTLKCPG NSSNLSPPAL QQPAHWQLLF QPIDRNVYLR RGAAIPVVDL  60
AEDEIDVSSP NDSTVSSLSG KRSDREANNV NLNGDENEAE RASSSGKMSD EEDGGRKKLR  120
LTREQSAVLE DMFRDHNTLN QKQKVALAKQ LDLRPRQVEV WFQNRRARTK LKQTEVDCEY  180
LKRCCENLTE ENRRLHKEVQ ELRALKLSPQ MYMQMTPATT LTICPSCERV SSSAAAGGGN  240
GHVAGASGSG VNNSVGLQVQ PPVQMNIPWA TLPVHHAGGQ P*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1165173RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.12e-77HD-ZIP family protein