PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0070s0016.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 312aa    MW: 34180.4 Da    PI: 8.2647
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0070s0016.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.72e-1839100257
                          T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox   2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                          ++R+t+t++q+++L++l+++     p+ e++++++++l    +++ ++V++WFqN++a+e++
  Kaladp0070s0016.1.p  39 STRWTPTTDQIRILKDLYYNngVTSPTVEQIQRISDRLrqygKIEGKNVFYWFQNQKARERQ 100
                          58*****************85679************************************97 PP
2Wus_type_Homeobox106.51.7e-3438101264
    Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                          ++tRWtPt++Qi+iL++ly+ +G+ +P+ e+iqri+ +L++yGkie+kNVfyWFQN+kaRerqk
  Kaladp0070s0016.1.p  38 SSTRWTPTTDQIRILKDLYYnNGVTSPTVEQIQRISDRLRQYGKIEGKNVFYWFQNQKARERQK 101
                          689***************9779*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MMGDDLGGGK LAATSFTRAQ TNSSNNHSLV NNNGGRRSST RWTPTTDQIR ILKDLYYNNG  60
VTSPTVEQIQ RISDRLRQYG KIEGKNVFYW FQNQKARERQ KTRFNTTSTT TNNTAPAPLP  120
PASTVWKPSS LDSSTPHIHT AAAAAAAASK YSDINNNQNL IYPAGHNQMS GFGYAASVTM  180
EKSFRDCSIS TGGSSFGWAK GGMTDHHLSR HPYPHTSPYA IYNQRKSINS DAYHELLAST  240
SDHHEHGDHS RGAEIETLPL FPMHGEDINY GFCHLNSSAE TDGSWFNRDV GGGSRASLEL  300
SLNSYAGMDH T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-40WOX family protein