PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0070s0052.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 221aa    MW: 24655.5 Da    PI: 9.2064
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0070s0052.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-202781256
                         T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         +k+ +f++eq++ Le +F ++++p+  ++++LA++lgL+ rqV +WFqNrRa+ k
  Kaladp0070s0052.1.p 27 KKKKRFSDEQIRSLEVVFGSESKPDPGSKQQLAAELGLQPRQVAIWFQNRRARLK 81
                         67889************************************************98 PP
2HD-ZIP_I/II1185.3e-3827119193
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+r+s+eq+++LE  F +e+k +p  K++la eLglqprqva+WFqnrRAR k kq+E++y++Lk++ydal+ + e+L+ke+++L+++
  Kaladp0070s0052.1.p  27 KKKKRFSDEQIRSLEVVFGSESKPDPGSKQQLAAELGLQPRQVAIWFQNRRARLKPKQIEREYDSLKASYDALACKFESLKKENQSLTAQ 116
                          59***************************************************************************************9 PP

          HD-ZIP_I/II  91 lke 93 
                          l++
  Kaladp0070s0052.1.p 117 LRT 119
                          986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MTFHEASVCR SARNNNSSGG GGNKMMKKKK RFSDEQIRSL EVVFGSESKP DPGSKQQLAA  60
ELGLQPRQVA IWFQNRRARL KPKQIEREYD SLKASYDALA CKFESLKKEN QSLTAQLRTL  120
TEKFERVRMD RNGRMGEQTT ASDSAEQAKH RVGDDQRQGG SGEEKLRVVE QLGGGGGGSI  180
PLEMMYSSPF ASSANSWSSE YSCFLDQSTS CGSSQWWEFW *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17684RRARLKPKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61890.12e-35HD-ZIP family protein