PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0106.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ZF-HD
Protein Properties Length: 292aa    MW: 31839.8 Da    PI: 8.9837
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0106.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer90.31.8e-284493357
          ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                         +  YkeC+kNhAa++Ggha+DGCgE+mp         +lkCaACgCHRnFHR ++
  Kaladp0071s0106.1.p 44 TSSYKECQKNHAAAIGGHALDGCGEYMPP-----PLPSLKCAACGCHRNFHRLDT 93
                         678*************************9.....5789**************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDSGMVAMKM SSDQQAQAQQ LCFKALSFSG KKERSRNEQR EHETSSYKEC QKNHAAAIGG  60
HALDGCGEYM PPPLPSLKCA ACGCHRNFHR LDTPSAAVRV EARTIAAAPI FSHPPRRFSS  120
ASPSSSSSPS RSEAPISSIY PSAPQILMSL SSGVEMTSGH AITPATAPDP IKLCFDEDVK  180
TDKPKKRFRT KFSAEQKEKM RRFAEGFGWR MQRTDDDAVK RFCDEIGVCR SVLKVWMHNN  240
RSRNLMGINR NNNFEYNGGG LTGGRLDSEE MHVVGNNGGI QSTDGGSSSS V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-44ZF-HD family protein