PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0191.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 229aa    MW: 25649.1 Da    PI: 6.6304
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0191.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.76.6e-11103133131
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkas 31 
                          +r++h ++Er+RR+++N+ ++ Lr+l+P+++
  Kaladp0071s0191.1.p 103 QRMTHIAVERNRRKQMNEYLAVLRTLMPSSY 133
                          79***************************73 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MALDAVVFPQ DPFGHNFTFK DYFQGIMEDE LSGGINYNLG VVDNIDTDSW SYDQLGFHKA  60
QEDKQSLLTT APEPSPAKDP PVTARRKRRR TKSCKNKEEV ENQRMTHIAV ERNRRKQMNE  120
YLAVLRTLMP SSYAQRGRHG AAEIEVTMVE SHANVKILAK RCSGQLVKLV AAFQSLSLTF  180
QHLSVSSLDH MVMYSVSVKV EEGCELNSVD EIAAAVNQML RNIDESLG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18690RKRRR
28691RKRRRT
3104115RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-31bHLH family protein