PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0216.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 189aa    MW: 20907.5 Da    PI: 9.0042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0216.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.31.8e-1558109155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++N+ ++ Lr+l+P++   ++++ + a+i   A++Y+k+L+
  Kaladp0071s0216.1.p  58 QRMTHIAVERNRRKQMNEYLAVLRTLMPSS---YAQRGDQASIIGGAINYVKELE 109
                          79****************************...*******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MKFTTPDGLG IKESNGEDKQ SLLTTAPEPS PAKDPPVAAR RKRRRTKACK NKEEVENQRM  60
THIAVERNRR KQMNEYLAVL RTLMPSSYAQ RGDQASIIGG AINYVKELEQ LLQTLEAQKS  120
TKNPKQQDDH HSPFANFFTF PQYTAGATAA TPTSTTDGDD EVAAEGRHGA AEIEVTMVES  180
HANVKILAK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14145RKRRR
24146RKRRRT
35970RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.16e-42bHLH family protein