PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0229.4.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 547aa MW: 59655.3 Da PI: 8.436

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0229.4.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.9	0.00016	70	90	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H Kaladp0071s0229.4.p 70 CEICNKGFQRDQNLQLHRRGH 90 *******************88 PP
2	zf-C2H2	10.9	0.0014	145	167	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H + + Kaladp0071s0229.4.p 145 WKCDKCPKKYAVKSDWKAHSKIC 167 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MMSQGLSPVP SSFLGFIEDQ IQNPDSSNTP ATQPSASSSA LKRKRNLPDP DSEVVALSPT 60 SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVVKKKVY ICPEKSCVHH 120 DPSRALGDLT GIKKHFSRKH GEKKWKCDKC PKKYAVKSDW KAHSKICGTK EHKCDCGTLF 180 SRKDSFITHR AFCTAVVDQS GSRFASSVAA GTNNPLSLRN DFLSENLGIP QGVDTNQFSG 240 GGFYPELSTS FHSYGHVSNS TDGSKSVRHI IPQWLDQHPA LNASAHLLMG NLAGNLSHEL 300 LLQNAGQVNL FGSSSSSQAP WLNKCTDQSA FGGANMSSLD QILGNTSGGS SGMMQVKRED 360 EILSNADFVE NMTTSLYNPN NLSHQQQQAI TSNQSAADQF LSSFYGRSNS NSLGLISSGA 420 SNGQVSFAGN NNNGFVDNSS FCIISRPPPP VIKDSDNTNA SLNHHHQMLL HEAVAAGRAK 480 PPETNPNAIK QQQAESSQTR DFLGVGRNEI MREEQFQLAM VSDQQFGSAA AGAESDMSHY 540 NQQWKH*

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MMSQGLSPVP SSFLGFIEDQ IQNPDSSNTP ATQPSASSSA LKRKRNLPDP DSEVVALSPT  60
SLMATNRFLC EICNKGFQRD QNLQLHRRGH NLPWKLKQRS NKEVVKKKVY ICPEKSCVHH  120
DPSRALGDLT GIKKHFSRKH GEKKWKCDKC PKKYAVKSDW KAHSKICGTK EHKCDCGTLF  180
SRKDSFITHR AFCTAVVDQS GSRFASSVAA GTNNPLSLRN DFLSENLGIP QGVDTNQFSG  240
GGFYPELSTS FHSYGHVSNS TDGSKSVRHI IPQWLDQHPA LNASAHLLMG NLAGNLSHEL  300
LLQNAGQVNL FGSSSSSQAP WLNKCTDQSA FGGANMSSLD QILGNTSGGS SGMMQVKRED  360
EILSNADFVE NMTTSLYNPN NLSHQQQQAI TSNQSAADQF LSSFYGRSNS NSLGLISSGA  420
SNGQVSFAGN NNNGFVDNSS FCIISRPPPP VIKDSDNTNA SLNHHHQMLL HEAVAAGRAK  480
PPETNPNAIK QQQAESSQTR DFLGVGRNEI MREEQFQLAM VSDQQFGSAA AGAESDMSHY  540
NQQWKH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	2e-93	C2H2 family protein