PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0243.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 536aa MW: 58367.6 Da PI: 5.8568

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0243.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55	2.1e-17	189	238	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0071s0243.1.p 189 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 238 78*****************......55***********************98 PP
2	AP2	41.5	3.4e-13	281	331	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ g +k+++lg f+t+ eAa+a+++a+ + +g Kaladp0071s0243.1.p 281 SKFRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDTEIEAARAYDRAAIRCNG 331 79******.7**...5...334336******99********98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MLLRQRVDQQ QSSDSAAERV WSVSGDVELE MMSGGGEGGL VLDLNLSVGV SSESTRSGES 60 LLLMSEKFTG GSGTQMDESG NSNSSVVNAV EADDDSCSTR AVDMFAYFDA SKDGDGDVRT 120 DVMTKQLFPM METGSVDEAD GVVEGHGSRN WIDLSGNYGS IPEVQMVRQQ AQQQQVAKKS 180 RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGPD 240 ADINFSFSDY EEDLKQTKNL SKEEFVQILR RRSNGFSRGS SKFRGVTLHK CGRWEARMGQ 300 LLGKKYIYLG LFDTEIEAAR AYDRAAIRCN GKEALTNFEP STYEEELISM ATGTGCDYEL 360 DLSLGISIPS PVRATVQGSG AVPAQSCVGS YDAHSRNRPW VLNSTTPDGL FKGPTVASEN 420 LSPNIRGYPL LYNSEDRAPA KTNAVHHTPG FPTSPWQSHG HVTYPPVSLF SSTSAAASSG 480 FQSPVPPALP TNPFSSPNLH FQLMASTGQS ASPSNLQCQM KPPRSSFITE DVNNF*

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MLLRQRVDQQ QSSDSAAERV WSVSGDVELE MMSGGGEGGL VLDLNLSVGV SSESTRSGES  60
LLLMSEKFTG GSGTQMDESG NSNSSVVNAV EADDDSCSTR AVDMFAYFDA SKDGDGDVRT  120
DVMTKQLFPM METGSVDEAD GVVEGHGSRN WIDLSGNYGS IPEVQMVRQQ AQQQQVAKKS  180
RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGPD  240
ADINFSFSDY EEDLKQTKNL SKEEFVQILR RRSNGFSRGS SKFRGVTLHK CGRWEARMGQ  300
LLGKKYIYLG LFDTEIEAAR AYDRAAIRCN GKEALTNFEP STYEEELISM ATGTGCDYEL  360
DLSLGISIPS PVRATVQGSG AVPAQSCVGS YDAHSRNRPW VLNSTTPDGL FKGPTVASEN  420
LSPNIRGYPL LYNSEDRAPA KTNAVHHTPG FPTSPWQSHG HVTYPPVSLF SSTSAAASSG  480
FQSPVPPALP TNPFSSPNLH FQLMASTGQS ASPSNLQCQM KPPRSSFITE DVNNF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-87	AP2 family protein