PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0243.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 506aa MW: 54965.9 Da PI: 6.3582

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0243.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55.1	1.9e-17	159	208	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0071s0243.2.p 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 208 78*****************......55***********************98 PP
2	AP2	41.6	3.2e-13	251	301	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ +k grW+A+ g +k+++lg f+t+ eAa+a+++a+ + +g Kaladp0071s0243.2.p 251 SKFRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDTEIEAARAYDRAAIRCNG 301 79******.7**...5...334336******99********98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MMSGGGEGGL VLDLNLSVGV SSESTRSGES LLLMSEKFTG GSGTQMDESG NSNSSVVNAV 60 EADDDSCSTR AVDMFAYFDA SKDGDGDVRT DVMTKQLFPM METGSVDEAD GVVEGHGSRN 120 WIDLSGNYGS IPEVQMVRQQ AQQQQVAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC 180 GKQVYLGGFD TAHAAARAYD RAAIKFRGPD ADINFSFSDY EEDLKQTKNL SKEEFVQILR 240 RRSNGFSRGS SKFRGVTLHK CGRWEARMGQ LLGKKYIYLG LFDTEIEAAR AYDRAAIRCN 300 GKEALTNFEP STYEEELISM ATGTGCDYEL DLSLGISIPS PVRATVQGSG AVPAQSCVGS 360 YDAHSRNRPW VLNSTTPDGL FKGPTVASEN LSPNIRGYPL LYNSEDRAPA KTNAVHHTPG 420 FPTSPWQSHG HVTYPPVSLF SSTSAAASSG FQSPVPPALP TNPFSSPNLH FQLMASTGQS 480 ASPSNLQCQM KPPRSSFITE DVNNF*

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MMSGGGEGGL VLDLNLSVGV SSESTRSGES LLLMSEKFTG GSGTQMDESG NSNSSVVNAV  60
EADDDSCSTR AVDMFAYFDA SKDGDGDVRT DVMTKQLFPM METGSVDEAD GVVEGHGSRN  120
WIDLSGNYGS IPEVQMVRQQ AQQQQVAKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC  180
GKQVYLGGFD TAHAAARAYD RAAIKFRGPD ADINFSFSDY EEDLKQTKNL SKEEFVQILR  240
RRSNGFSRGS SKFRGVTLHK CGRWEARMGQ LLGKKYIYLG LFDTEIEAAR AYDRAAIRCN  300
GKEALTNFEP STYEEELISM ATGTGCDYEL DLSLGISIPS PVRATVQGSG AVPAQSCVGS  360
YDAHSRNRPW VLNSTTPDGL FKGPTVASEN LSPNIRGYPL LYNSEDRAPA KTNAVHHTPG  420
FPTSPWQSHG HVTYPPVSLF SSTSAAASSG FQSPVPPALP TNPFSSPNLH FQLMASTGQS  480
ASPSNLQCQM KPPRSSFITE DVNNF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	7e-89	AP2 family protein