PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0271.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WOX
Protein Properties Length: 213aa    MW: 23736.9 Da    PI: 10.7425
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0271.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.3e-20665357
                         --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         +R+++t+eq+ +Leel+++  r+p+a+++++++ +l    +++ ++V++WFqN++a+e++
  Kaladp0071s0271.1.p  6 SRWCPTPEQVMILEELYKSgIRTPNAAQIQQITCHLsyhgKIEGKNVFYWFQNHKARERQ 65
                         8*****************99**************************************97 PP
2Wus_type_Homeobox120.47.6e-39466264
    Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                         +++RW+PtpeQ++iLeelyksG+rtPn+++iq+it +L+ +Gkie+kNVfyWFQN+kaRerqk
  Kaladp0071s0271.1.p  4 SSSRWCPTPEQVMILEELYKSGIRTPNAAQIQQITCHLSYHGKIEGKNVFYWFQNHKARERQK 66
                         689***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MSSSSSRWCP TPEQVMILEE LYKSGIRTPN AAQIQQITCH LSYHGKIEGK NVFYWFQNHK  60
ARERQKLKRN KLGKQYCQAS PQMQLPSSSA SLQRSSATAS FGLHQAPFCT CTPSSSVGFL  120
KQEGEPARNN QMPKRRMNNH RRRSCGDGAG GKSMIRACDQ SWKQAKVNNA GSTHPTLCSS  180
NLQPLRTLQL FPVKATNLRQ ESGSFANNQF LT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.12e-37WOX family protein