PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0395.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 638aa MW: 70342.4 Da PI: 7.0948

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0395.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	51	3.6e-16	359	418	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g Kaladp0071s0395.1.p 359 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 418 78*****************988886678446***********************98 PP
2	AP2	46.1	1.2e-14	461	512	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Kaladp0071s0395.1.p 461 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDVAAIKFRG 512 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MKFMDGDGVN DSSNTNNNHS SSTGSNWLLG FSLSTHMKLE QQQQQEVNAS DLQFHHYEHH 60 HHNSNHHQPQ HHHNQSQACV AAVSSVESTP GFFLYAPPHP ISSSAQLSYA DQTNGLQFHY 120 SPSSCLSAMP LNRSHPYTDQ GMANGSSPKL EDFLGVAAMG AHQHSEPMST LSSNTGSKNM 180 FFHHNADHDL DNHVALPSNS SIQQSSLDFV CDQNMYLNGL SCHHHLYQAQ PAAPSQDQDH 240 LQASNPNSQL THQAVTVAQI SDDQVKNWVS VQHPQFEQQM GGNGKDHMVM SHGELQALTL 300 SMSPGSQLSC VTAQISPTAA AESASLDSRK RAFNNVGQNQ NQKQPVHRKS IDTFGQRTSQ 360 YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS 420 THINFSVENY QDELEEMKNM SRQEYVAHLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG 480 RVAGNKDLYL GTFSTQEEAA EAYDVAAIKF RGVNAVTNFD ISRYDVGRII ASNTLLAGEL 540 ARRNSSDPSS SPKTELIRSD QEAATGHQSC PESIMENIAN SLSSSGPSPV MALCPTPPTG 600 SKLGMSPGVG WIPSAGRHAA ERLPLPHFPI FTAWQDS*

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MKFMDGDGVN DSSNTNNNHS SSTGSNWLLG FSLSTHMKLE QQQQQEVNAS DLQFHHYEHH  60
HHNSNHHQPQ HHHNQSQACV AAVSSVESTP GFFLYAPPHP ISSSAQLSYA DQTNGLQFHY  120
SPSSCLSAMP LNRSHPYTDQ GMANGSSPKL EDFLGVAAMG AHQHSEPMST LSSNTGSKNM  180
FFHHNADHDL DNHVALPSNS SIQQSSLDFV CDQNMYLNGL SCHHHLYQAQ PAAPSQDQDH  240
LQASNPNSQL THQAVTVAQI SDDQVKNWVS VQHPQFEQQM GGNGKDHMVM SHGELQALTL  300
SMSPGSQLSC VTAQISPTAA AESASLDSRK RAFNNVGQNQ NQKQPVHRKS IDTFGQRTSQ  360
YRGVTRHRWT GRYEAHLWDN SCKKEGQTRK GRQVYLGGYD MEEKAARAYD LAALKYWGPS  420
THINFSVENY QDELEEMKNM SRQEYVAHLR RKSSGFSRGA SIYRGVTRHH QHGRWQARIG  480
RVAGNKDLYL GTFSTQEEAA EAYDVAAIKF RGVNAVTNFD ISRYDVGRII ASNTLLAGEL  540
ARRNSSDPSS SPKTELIRSD QEAATGHQSC PESIMENIAN SLSSSGPSPV MALCPTPPTG  600
SKLGMSPGVG WIPSAGRHAA ERLPLPHFPI FTAWQDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-145	AP2 family protein