PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0072s0011.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 511aa MW: 56567.3 Da PI: 6.0087

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0072s0011.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	153.5	9.6e-48	4	131	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 p+G+rFhPtd+elv++yL+ k +g++ ++ + i+evd++k+ePw++p + + +++++ewyfF +rd+ky +++r+nratk+g+Wk tg+d Kaladp0072s0011.1.p 4 PVGYRFHPTDQELVNHYLRLKNQGSERDV-SNIREVDVCKWEPWEIPgHlCSDSDDQEWYFFGRRDSKYGKSTRSNRATKDGFWKPTGRD 92 89**********************999.77***********6346677899***************************** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++++++l+g+kktLvfykgra+++++t+Wvmheyr+ Kaladp0072s0011.1.p 93 RFIKTSSKKLIGTKKTLVFYKGRAQRAHRTRWVMHEYRA 131 ***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSKPVGYRFH PTDQELVNHY LRLKNQGSER DVSNIREVDV CKWEPWEIPG HLCSDSDDQE 60 WYFFGRRDSK YGKSTRSNRA TKDGFWKPTG RDRFIKTSSK KLIGTKKTLV FYKGRAQRAH 120 RTRWVMHEYR ASADKHNPQA FVLYLLKKKE DENPEISNSD DKSSPSVSLL INNNAPSYSP 180 STPTLLRSSG NFSSSDQTRV NQNWKEQEVS SHAQNVHSPC LEDDIDFQAF ERFFDGQPPT 240 WDGLDRMLPA IPLSGVYPNQ GPTHMTARYI NVSSNDHGVT QFSNSKSRQE AVHNIDDVVS 300 SVFTLNTLTL DAESGTETDN DVPQSLFDEE AVYGGSAYLS DSESSNAEFY NDMILAHEVS 360 LSTNNSGHFE LQAGEDGSIK RIASGRIHGS ANNPRTGTNS EVPAQASSKK ERSYVPPKKL 420 ESKIVEAVSD DDSSEGPAKS SAILEVSGNE SGGAVGSLGR EGRGTGFMHY AENPRVNNGT 480 TPPSNYILNL IMGIFLTGVI MGEVLFGLVT *

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSKPVGYRFH PTDQELVNHY LRLKNQGSER DVSNIREVDV CKWEPWEIPG HLCSDSDDQE  60
WYFFGRRDSK YGKSTRSNRA TKDGFWKPTG RDRFIKTSSK KLIGTKKTLV FYKGRAQRAH  120
RTRWVMHEYR ASADKHNPQA FVLYLLKKKE DENPEISNSD DKSSPSVSLL INNNAPSYSP  180
STPTLLRSSG NFSSSDQTRV NQNWKEQEVS SHAQNVHSPC LEDDIDFQAF ERFFDGQPPT  240
WDGLDRMLPA IPLSGVYPNQ GPTHMTARYI NVSSNDHGVT QFSNSKSRQE AVHNIDDVVS  300
SVFTLNTLTL DAESGTETDN DVPQSLFDEE AVYGGSAYLS DSESSNAEFY NDMILAHEVS  360
LSTNNSGHFE LQAGEDGSIK RIASGRIHGS ANNPRTGTNS EVPAQASSKK ERSYVPPKKL  420
ESKIVEAVSD DDSSEGPAKS SAILEVSGNE SGGAVGSLGR EGRGTGFMHY AENPRVNNGT  480
TPPSNYILNL IMGIFLTGVI MGEVLFGLVT *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	7e-51	NAC family protein