PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0072s0069.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 255aa    MW: 29152.8 Da    PI: 7.9161
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0072s0069.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.4e-17855148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         rg+WT+eEd+ll+++++++G g W+ +  + g++R++k+c++rw++yl
  Kaladp0072s0069.1.p  8 RGAWTPEEDKLLKECIEKYGVGKWNEVVTRSGLNRCRKSCRLRWLDYL 55
                         89*******************************************997 PP
2Myb_DNA-binding40.94.7e-1361106148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg + ++E +l+ +++k+lG++ W++Ia +++ gRt++ +k++w++++
  Kaladp0072s0069.1.p  61 RGGFGEDEVDLICKLHKLLGNR-WSLIAGRLP-GRTANGVKNYWNSHM 106
                          677899****************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSGLGVRRGA WTPEEDKLLK ECIEKYGVGK WNEVVTRSGL NRCRKSCRLR WLDYLQPNIK  60
RGGFGEDEVD LICKLHKLLG NRWSLIAGRL PGRTANGVKN YWNSHMRKKQ HQKVMCHKAS  120
SHHQTTTPNK EGCVIVKPQP WRFSKTSLAS LQKKLSVQFQ HNFHCDRVKN DTKQTCSPYS  180
FELQEDALSI SSWWEDLLQK DDNFFVDQNA DDGSVGICWS DVDAGTTTAE CNEADGVVNL  240
DDQELYFNIQ LWDS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.13e-58MYB family protein