PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0073s0027.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 292aa    MW: 33046.9 Da    PI: 8.6689
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0073s0027.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.52.4e-05124143120
                          EEETTTTEEESSHHHHHHHH CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                          ++C+ C+k+F+r  n++ H+
  Kaladp0073s0027.1.p 124 FSCSVCSKTFNRYNNMQMHM 143
                          89*****************9 PP
2zf-C2H2171.6e-05209231123
                          EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                          + C++Cgk F  k + ++H +++
  Kaladp0073s0027.1.p 209 FACHKCGKAFAVKGDWRTHEKNC 231
                          78*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MQQLSSFTYK SPRSSNQSSY QHQEDTDFIQ LSLSPPGQQR LSKTKQQQPH SHPPSTQTLK  60
ASNTFNSSHT NGSVDRDLHS GSHMERVNNA SDAVGKGSSH SGFIEKPPYW IPSPAQILVG  120
PTQFSCSVCS KTFNRYNNMQ MHMWGHGSQY RKGPESLRGT KLTSTMLRVP CYCCIEDCRN  180
NINHLRPKPL KDFRTLQTHY KRKHGAKPFA CHKCGKAFAV KGDWRTHEKN CGKIWLCVCG  240
SDFKHKRSLK DHVRALGDCH GPQSLEFYDR AIHHEDAEDD EGEELDGHED H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.11e-101C2H2 family protein