PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0073s0135.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family SBP
Protein Properties Length: 187aa    MW: 20723.4 Da    PI: 9.0974
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0073s0135.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP130.18.1e-4167143177
                          --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
                  SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                          +Cq+++C adl+ ak+yhrrhkvCe+h+ka+vvl++g++qrfCqqCsrfhe+sefDe+krsCrrrLa+hnerrrk++
  Kaladp0073s0135.1.p  67 CCQADKCGADLAVAKQYHRRHKVCEAHAKAQVVLLAGIRQRFCQQCSRFHEVSEFDESKRSCRRRLAGHNERRRKHS 143
                          6**************************************************************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MDCSRRGKHA MNKAVKSESS DASLTAVIAC EEDEDDDQKV RKLGSLQVLV EQGKSRASSC  60
KPGVARCCQA DKCGADLAVA KQYHRRHKVC EAHAKAQVVL LAGIRQRFCQ QCSRFHEVSE  120
FDESKRSCRR RLAGHNERRR KHSPAAAAVD PQGQESSSQK GIVVCGVIDD RGRFDYSLPE  180
KNFHIR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.14e-42SBP family protein