PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0074s0017.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YA
Protein Properties Length: 219aa    MW: 24493.6 Da    PI: 10.0397
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0074s0017.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA91.21.3e-28153209158
            CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                          d p++VNaKQy++I++RR  Rak+e  kk  + +rkpy+heSRh hA+rR Rg+gGrF
  Kaladp0074s0017.2.p 153 DGPIFVNAKQYHGIIRRRLYRAKAELVKKS-IGARKPYMHESRHLHAVRRVRGCGGRF 209
                          57************************9999.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MQTVYLKEYE GMSEKTTGHL SSGQTMPWWV AESHSDPAEA FRHLKSSPVE HATAGRQFTL  60
TKSDHSRTLK GAEKDAANQF TISPGGQRTQ QVQASVNIQP TLSDYHTHLE PGYGQAMVYP  120
KYPYGDQSCW AMSTYGPQVQ GRVMLPQNST ADDGPIFVNA KQYHGIIRRR LYRAKAELVK  180
KSIGARKPYM HESRHLHAVR RVRGCGGRFL NTKVSDAGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-38NF-YA family protein