PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0074s0019.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 219aa    MW: 25239.8 Da    PI: 7.7015
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0074s0019.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF25.91.3e-081150342
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         i n++ r + f kRr  ++ K +E+SvL +  ++ +i+s+
  Kaladp0074s0019.1.p 11 IPNYTARRTAFRKRRDSLIRKLNEISVLAGGAACGVILSP 50
                         789***************************9999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MTRKKVQLAW IPNYTARRTA FRKRRDSLIR KLNEISVLAG GAACGVILSP FEGDPPLFWP  60
SSINEVLERF FSLRELEQQK RLVTMESYIN DEVSKLKQII QKEHKVIREA EVSYLMNSIH  120
FHGSPIATLR YDETSDLFWY FEELKNKCEL RLNQLDPNAS ATQPLQPGIT MMQEPQMGMN  180
DPTWLTAGNP INAPFPHPPP QFESHHQVGG FYNNNTWH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVQLAWIPNYTARRTAFRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.29e-25M-type_MADS family protein