PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0074s0020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 223aa    MW: 25534 Da    PI: 6.8619
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0074s0020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF23.19.4e-081150342
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                         i n++ r   f kRr  ++ K +E+SvL +  ++ +i+s+
  Kaladp0074s0020.1.p 11 IPNYTARRAAFRKRRDSLIRKLNEISVLAGGAACGVILSP 50
                         789***************************9999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTRKKVKLAW IPNYTARRAA FRKRRDSLIR KLNEISVLAG GAACGVILSP FEGDPPVFWP  60
PSINEVLERY FSLPELEQQK RLVTAESYIH DEISKFNEII QKEHKMIREA EVSYHMNSIH  120
FHGSHIATLS YDETSDLFWY FEEMKNKCEL RLNQLDPNAS APQPLHPEII MMQEPQMGMV  180
NTNDPTWLTA GNPINAPFPH PQPPFGSHHQ AAGFYNNNNT GY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAWIPNYTARRAAFRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.23e-25M-type_MADS family protein