PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0075s0039.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 189aa    MW: 21442.8 Da    PI: 7.3052
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0075s0039.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52e-15243548
                         -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         T  E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
  Kaladp0075s0039.2.p  2 TSTEERLVIELHAKWGNR-WSRIARRLP-GRTDNEIKNFWRTHM 43
                         889***************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MTSTEERLVI ELHAKWGNRW SRIARRLPGR TDNEIKNFWR THMRKKAQER KRVNYLSTTS  60
SESESSPSSS NHTQGSRCDS GKESFYDTGG NATVTAMGKK QTDEEGERIK VDDIWKDIDT  120
SKDTITPLND GYNQGLCNYS CTPLVSPLWE FCPDSLWRMD EEDSKMLTPS NNYLLACCEA  180
GKSRLRGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.26e-45MYB_related family protein