PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0075s0039.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 252aa    MW: 28845.2 Da    PI: 8.473
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0075s0039.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.78.7e-16855148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+WT++Ed ll ++v ++G ++W+ +a+  g++Rt+k+c++rw +yl
  Kaladp0075s0039.3.p  8 KGPWTEQEDFLLENVVGLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYL 55
                         79********************************************97 PP
2Myb_DNA-binding51.62.1e-1661106148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++T  E+ l +++++++G++ W++Iar+++ gRt++++k++w++++
  Kaladp0075s0039.3.p  61 RGKMTSTEERLVIELHAKWGNR-WSRIARRLP-GRTDNEIKNFWRTHM 106
                          89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MQQEDTRKGP WTEQEDFLLE NVVGLFGDRR WDFVAKVSGL NRTGKSCRLR WVNYLHPGLK  60
RGKMTSTEER LVIELHAKWG NRWSRIARRL PGRTDNEIKN FWRTHMRKKA QERKRVNYLS  120
TTSSESESSP SSSNHTQGSR CDSGKESFYD TGGNATVTAM GKKQTDEEGE RIKVDDIWKD  180
IDTSKDTITP LNDGYNQGLC NYSCTPLVSP LWEFCPDSLW RMDEEDSKML TPSNNYLLAC  240
CEAGKSRLRG S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.11e-88MYB family protein