PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0009.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ZF-HD
Protein Properties Length: 238aa    MW: 26179 Da    PI: 7.669
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0009.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.21.5e-3147103360
          ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                           vrY+eClkNhA+ +Ggha+DGCgEf+++ g++gt ++l+CaAC CHRnFHR+e++ e
  Kaladp0076s0009.1.p  47 VVRYRECLKNHAVGIGGHALDGCGEFIAA-GDDGTLESLTCAACSCHRNFHRKETDGE 103
                          69**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MDQFGHNHDH GNEIEEEEIV PVHESLTNLR RLNVSGEGGS SGGRRRVVRY RECLKNHAVG  60
IGGHALDGCG EFIAAGDDGT LESLTCAACS CHRNFHRKET DGESAFHPNA QFSPYYHHRS  120
PPPGFLHMAL PPSVAEGRHR QPLALQSREE LDDMSNPSSS GGGGGGGSTP GGGNKKRFRT  180
KFTAEQKERM VELAERLGWR LQRQDDALVQ QFCLDNGVSR QVLKVWMHNN KNTFGKK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-59ZF-HD family protein