PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0076s0024.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 259aa    MW: 29076 Da    PI: 5.3839
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0076s0024.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.1e-1952106357
                          --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
             Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                          k++++++ q+++Le++F  ++++  e++ +LA+++gL+ rqV vWFqNrRa++k+
  Kaladp0076s0024.1.p  52 KKRRLSSAQVKALERHFSADNKLEPERKLKLAAEIGLQPRQVAVWFQNRRARWKN 106
                          56689************************************************95 PP
2HD-ZIP_I/II120.68.2e-3951143193
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          ekkrrls+ qvk+LE++F++++kLeperK +la e+glqprqvavWFqnrRAR+k+kqlE++ye+Lk+ y +lk + +++e+e+e+L++e
  Kaladp0076s0024.1.p  51 EKKRRLSSAQVKALERHFSADNKLEPERKLKLAAEIGLQPRQVAVWFQNRRARWKNKQLEREYEVLKSGYAELKVSYASVEREKEALTAE 140
                          69**************************************************************************************99 PP

          HD-ZIP_I/II  91 lke 93 
                          l++
  Kaladp0076s0024.1.p 141 LMD 143
                          975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MKRFCSSSSD SLLSFVSMPS PPQDDGDYCR ELQAMLDGLD EEENANGAQT EKKRRLSSAQ  60
VKALERHFSA DNKLEPERKL KLAAEIGLQP RQVAVWFQNR RARWKNKQLE REYEVLKSGY  120
AELKVSYASV EREKEALTAE LMDLKTKLKE DILVFSDSAR NSTSDEQESS KLNDVVLHQH  180
STSHHTHNHN YHQTTWSSSS SSPLLQFDCS TSHPPPQDLA WFQQTGGGVD GFCSVYGSPG  240
DEGSPAGLNW LSFEQSDF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15281KKRRLSSAQVKALERHFSADNKLEPERKLK
2100108RRARWKNKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-39HD-ZIP family protein