PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0078s0017.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 348aa MW: 38781.4 Da PI: 9.1432

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0078s0017.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	146.3	1.6e-45	18	178	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.....................vikevdiykvePwdLpkkvkaeekewyfFskrdkkya 69 lppGfrF Ptd el+++yL +k+++++++ ++ + evd++++ePw++p ++ + ke+yf+s+rd+kya Kaladp0078s0017.1.p 18 LPPGFRFYPTDGELICDYLMNKISKTSTSSSSsircrdsnntdssssaalhvpQLIEVDLNTSEPWEIPGRACVGGKECYFYSQRDRKYA 107 79********************999555445677778899999999999866999********7777799********** PP NAM 70 tgkrknratksgyWkatgkdkevlskkgel............vglkktLvfykgrapkgektdWvmheyrl 128 tg r+nratk+gyWkatgkdk+v++++++ vg++ktLvfy+grap+g+kt+Wvmhe+rl Kaladp0078s0017.1.p 108 TGMRTNRATKTGYWKATGKDKAVYCSSSSRspspspspspslVGMRKTLVFYRGRAPRGRKTEWVMHEFRL 178 *********************84433567777778888*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MRKQRRSSSS IEVVEEKLPP GFRFYPTDGE LICDYLMNKI SKTSTSSSSS IRCRDSNNTD 60 SSSSAALHVP QLIEVDLNTS EPWEIPGRAC VGGKECYFYS QRDRKYATGM RTNRATKTGY 120 WKATGKDKAV YCSSSSRSPS PSPSPSPSLV GMRKTLVFYR GRAPRGRKTE WVMHEFRLLK 180 PPSLLSSSIK EPEDWVLCRV FHKHISGSRC ITQPASSPLP QLTHDPYLPL PQPQTDSSTI 240 ISMNQDRHHS NGDHQQVPCF SILSSHSQTM SYSYAAILSN APSFPIKPSN VEVVFDHHIT 300 MTATTDDSAS NKLKSKEDSL NNFDGGNGNS SSGIYLSESM WKHHQQY*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MRKQRRSSSS IEVVEEKLPP GFRFYPTDGE LICDYLMNKI SKTSTSSSSS IRCRDSNNTD  60
SSSSAALHVP QLIEVDLNTS EPWEIPGRAC VGGKECYFYS QRDRKYATGM RTNRATKTGY  120
WKATGKDKAV YCSSSSRSPS PSPSPSPSLV GMRKTLVFYR GRAPRGRKTE WVMHEFRLLK  180
PPSLLSSSIK EPEDWVLCRV FHKHISGSRC ITQPASSPLP QLTHDPYLPL PQPQTDSSTI  240
ISMNQDRHHS NGDHQQVPCF SILSSHSQTM SYSYAAILSN APSFPIKPSN VEVVFDHHIT  300
MTATTDDSAS NKLKSKEDSL NNFDGGNGNS SSGIYLSESM WKHHQQY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	8e-72	NAC family protein