PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0030.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 286aa    MW: 31415.2 Da    PI: 7.4694
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0030.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.2e-19117171256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ ++t+eq  +Lee+F+++++++ +++  LAk+l+L +rqV vWFqNrRa+ k
  Kaladp0079s0030.1.p 117 RKKLRLTREQSAVLEEMFKEHNTLNPKQKVALAKQLDLRTRQVEVWFQNRRARTK 171
                          678899***********************************************98 PP
2HD-ZIP_I/II124.93.8e-40117206191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl++eq+++LEe+F+e+++L+p++Kv+la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
  Kaladp0079s0030.1.p 117 RKKLRLTREQSAVLEEMFKEHNTLNPKQKVALAKQLDLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-A 205
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0079s0030.1.p 206 L 206
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MAGDDGLELS LTLKCPGSQS NHSPPPPQQQ TPWHELFQPI DRSAYLRRGV ALVAAIPVVD  60
LADDEIDVSS PNDSTVSSLS GKRSDREANN VNVNGDENEA ERASSSGKMS DEEDGGRKKL  120
RLTREQSAVL EEMFKEHNTL NPKQKVALAK QLDLRTRQVE VWFQNRRART KLKQTEVDCE  180
YLKRCCENLT EENRRLQKEV QELRALKLSP QMYMQINPAT TLTMCPSCER VSSSAASAGA  240
GSGHVAVGAG ANGVRVNNAV GSQVQQPTIQ LNSPWAPLPV HHRKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166174RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.14e-83HD-ZIP family protein