PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0030.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 252aa    MW: 27681.2 Da    PI: 8.375
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0030.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.7e-1983137256
                          T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          rk+ ++t+eq  +Lee+F+++++++ +++  LAk+l+L +rqV vWFqNrRa+ k
  Kaladp0079s0030.2.p  83 RKKLRLTREQSAVLEEMFKEHNTLNPKQKVALAKQLDLRTRQVEVWFQNRRARTK 137
                          678899***********************************************98 PP
2HD-ZIP_I/II125.22.9e-4083172191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          +kk+rl++eq+++LEe+F+e+++L+p++Kv+la++L+l++rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +
  Kaladp0079s0030.2.p  83 RKKLRLTREQSAVLEEMFKEHNTLNPKQKVALAKQLDLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENRRLQKEVQELR-A 171
                          69*************************************************************************************9.5 PP

          HD-ZIP_I/II  91 l 91 
                          l
  Kaladp0079s0030.2.p 172 L 172
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVILCADRSA YLRRGVALVA AIPVVDLADD EIDVSSPNDS TVSSLSGKRS DREANNVNVN  60
GDENEAERAS SSGKMSDEED GGRKKLRLTR EQSAVLEEMF KEHNTLNPKQ KVALAKQLDL  120
RTRQVEVWFQ NRRARTKLKQ TEVDCEYLKR CCENLTEENR RLQKEVQELR ALKLSPQMYM  180
QINPATTLTM CPSCERVSSS AASAGAGSGH VAVGAGANGV RVNNAVGSQV QQPTIQLNSP  240
WAPLPVHHRK L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132140RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.11e-81HD-ZIP family protein