PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0080.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 699aa    MW: 77827.5 Da    PI: 6.0139
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS400.41.8e-1223096832374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                          v  L++c+ea+ s++  ++++++a+l +lasp+g +p+ Rl+ayfte+La r +r +++l++  +p++ +    +e+ ++++l++++sPi
  Kaladp0079s0080.1.p 309 VGDLIDCVEAIGSKNILAINHFIAKLGDLASPRGrTPIVRLVAYFTEGLAIRTSRIWPNLFHLATPRDLD-LADDEHGTSFRLLNQISPI 397
                          5689******************************99*************************999999987.6788999999********* PP

                 GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                          +kf h+  N+ +l+a+eg+++vHiiDfdi+qGlQWp+++q+LasR+++p ++RiTgvg+    sk+el+etg+rLa fA ++++pfef++
  Kaladp0079s0080.1.p 398 PKFIHFSSNEILLRAFEGKQKVHIIDFDIKQGLQWPSFFQSLASRSRPPIHVRITGVGE----SKHELNETGDRLAGFAGAMNLPFEFHP 483
                          ***********************************************************....9************************** PP

                 GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
                           v++rled++l++L+vk+gE++aVn+++qlh++l +s   +   +++L l++s++P+vvv++eqea++n +s+ +r++++l+yysa+fds
  Kaladp0079s0080.1.p 484 -VVDRLEDVRLWMLHVKEGESVAVNCMFQLHKTLYDSSGGAL--RDLLGLIRSTNPTVVVMAEQEASTNFQSLDTRVCNSLKYYSAIFDS 570
                          .7*******************************966655444..89******************************************** PP

                 GRAS 271 leaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee..... 354
                          l+ +lp+ s  +rik E++ +grei+n++aceg+er erhet+ kW++ +++ GF+++++se++  q+++ll++++++ ++v+ +     
  Kaladp0079s0080.1.p 571 LHCSLPSPSaPARIKTEEM-FGREIRNIIACEGSERYERHETFTKWKKLMSDGGFTSMRISEREILQIQMLLKMYSFHRFSVKTQsdeee 659
                          *******9999*******9.********************************************************888***94444556 PP

                 GRAS 355 ....sgslvlgWkdrpLvsvSaWr 374
                                +l+l W+d+pL++vSaW+
  Kaladp0079s0080.1.p 660 egapATALTLSWEDEPLYTVSAWT 683
                          677778899**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 699 aa     Download sequence    
MLAGCSSSTL LSPRHRLRIE ASKQFQACHF PLTNSMSTQR LDMQCSFPRR EAAISQPIRP  60
VGISVDQKPI ESRAGSCSLK QQNIHLPPLA TRPRLSLRGR RETEGGIWAE GNNLKRFAER  120
SPVDRSKKVK RKRGSSSKDV EQSEGAVEGD DDDDDDDASG LRLGQLDGRS FWFQSGFEVS  180
SYLPGLSQPE APFSLTVSQD EDRVCFVPSE VISPPPLPLT NNPWIDFGVS KITHLGDKNV  240
ETSHRQPAVR EPSESRTSYE SSLSLRLNEN PPPVHDSGNG SGNPHPLEGT PAQVVDESDE  300
EEQLGFELVG DLIDCVEAIG SKNILAINHF IAKLGDLASP RGRTPIVRLV AYFTEGLAIR  360
TSRIWPNLFH LATPRDLDLA DDEHGTSFRL LNQISPIPKF IHFSSNEILL RAFEGKQKVH  420
IIDFDIKQGL QWPSFFQSLA SRSRPPIHVR ITGVGESKHE LNETGDRLAG FAGAMNLPFE  480
FHPVVDRLED VRLWMLHVKE GESVAVNCMF QLHKTLYDSS GGALRDLLGL IRSTNPTVVV  540
MAEQEASTNF QSLDTRVCNS LKYYSAIFDS LHCSLPSPSA PARIKTEEMF GREIRNIIAC  600
EGSERYERHE TFTKWKKLMS DGGFTSMRIS EREILQIQML LKMYSFHRFS VKTQSDEEEE  660
GAPATALTLS WEDEPLYTVS AWTPTDAPGA SSSFSQRG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.10.0GRAS family protein