PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0143.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 231aa    MW: 25994.7 Da    PI: 6.2402
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0143.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY83.91.6e-26127185159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYG+K+ k++++ r+YY+Cts gC+vkk ver  ed ++v++ Y g H+he
  Kaladp0079s0143.1.p 127 LDDGYRWRKYGKKPLKNNPNLRNYYKCTSGGCQVKKIVERWIEDSSYVITQYDGVHTHE 185
                          59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MDLYSLENPN PSLDLYIDVD DYSLSQFDCF FLNELSNYEA GYGFIGGAEK DQSSYTSSPA  60
VTSPPEKVSR SEQDPLLLVQ MLVSGGASSS TNAAVNVMRN EGKRKMQGDG PKPQRVAFKT  120
KSKLDVLDDG YRWRKYGKKP LKNNPNLRNY YKCTSGGCQV KKIVERWIED SSYVITQYDG  180
VHTHESSCSY YYDNNNNHHL QGVTATDYYH CQNDDNTYIP SAAETKVHLK *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.17e-25WRKY family protein