PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0160.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 226aa    MW: 25949.7 Da    PI: 4.4153
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0160.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.65.8e-203487356
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                         k++++ ++ql++Le+ Fe ++++  e++ +LA +lgL+ rqV vWFqNrRa++k
  Kaladp0079s0160.1.p 34 KKRRLRPHQLKALERSFEAENKLESERKVQLAFELGLDPRQVAVWFQNRRARWK 87
                         556899***********************************************9 PP
2HD-ZIP_I/II119.12.3e-3834123291
          HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                          kkrrl  +q+k+LE+sFe+e+kLe+erKv+la eLgl+prqvavWFqnrRAR+ktkqlE+d++ L++ayd l+++ +++++++e+L  ++
  Kaladp0079s0160.1.p  34 KKRRLRPHQLKALERSFEAENKLESERKVQLAFELGLDPRQVAVWFQNRRARWKTKQLERDFNLLQSAYDDLRQNYDAVKRDNETLILQI 123
                          9***********************************************************************************998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MMKSSGSKRE FDSDVALEFE EDEEFMEGSA QPDKKRRLRP HQLKALERSF EAENKLESER  60
KVQLAFELGL DPRQVAVWFQ NRRARWKTKQ LERDFNLLQS AYDDLRQNYD AVKRDNETLI  120
LQIGEMKQKL MVESGSSEKI GEGHFGPSFN YETAFHNNVN VFSSDSATSG MQSEENNSFN  180
GVVSSCGIPW TVEDAPSLAM WPADTYSFLA DEEPDLMFDW YCQNP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18290RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.11e-41HD-ZIP family protein