PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0079s0164.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 25964.8 Da    PI: 8.3149
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0079s0164.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.61.9e-24959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+i+n + rqvtfskRr g++KKAeEL vLCda+v +++fsstgk ++ys+
  Kaladp0079s0164.1.p  9 KKINNVTARQVTFSKRRRGLFKKAEELAVLCDADVGLVVFSSTGKCFDYSN 59
                         689*********************************************985 PP
2K-box45.23.9e-16951742099
                K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          ++++L +e+ +  r +R++ GedLe L +++LqqLe+ Le +l++i ++K   ++++i el +k  +l +enk Lr++++
  Kaladp0079s0164.1.p  95 NYTRLSQEVAEKSRLLRRYRGEDLEGLGIEDLQQLEKSLEVGLSHIIETKGGKIMREIVELENKGMRLMKENKVLRHQVA 174
                          678999999999999**************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MAREKIQLKK INNVTARQVT FSKRRRGLFK KAEELAVLCD ADVGLVVFSS TGKCFDYSNF  60
GMQKILERRH LLSKNLEKLQ QPAPSLELQL VEDVNYTRLS QEVAEKSRLL RRYRGEDLEG  120
LGIEDLQQLE KSLEVGLSHI IETKGGKIMR EIVELENKGM RLMKENKVLR HQVARISDVY  180
IPRGADSAEN KMLEEGQSSE SVTNLCVSGG ASQDHESSDI SLRLGLPYCG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-96MIKC_MADS family protein