PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0079s0167.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 648aa MW: 71346.4 Da PI: 4.9711

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0079s0167.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	29.4	1.9e-09	402	460	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse...ngkr..krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV+ ++++ r++A+++d s +g + kr + g ++ +e+Aa+a++ a++k++g Kaladp0079s0167.1.p 402 SRFRGVTKHRWSSRYEAHLWDKSYartDG-QpgKRGRQGGYDKEEKAARAYDLAALKFWG 460 789****************66665544.4468888899**************9987 PP
2	AP2	39.7	1.2e-12	505	554	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GV++ +rg W A+I + + + +lg+f+t+eeAa+a++ a+ k++g Kaladp0079s0167.1.p 505 YRGVSRSNSRGHWQARIARV-----TdeRDLYLGSFDTEEEAAEAYDIAAIKFRG 554 9*************9996.....345***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
MDRGESRMIS LSSLTKTNEA AEYQHRFDTS SLSKYPQYPN KNGYEQENQQ AQYPEELIMS 60 APQPESSIKD PRAASNYELA PLPDQLDNFI ELPPMAFETQ QANLCMTDKT YKCALTADST 120 WYLFNSNNND NTGLENELAH AAGMHAMQPS PSPSTGSVTG SNSGFSPENG ADEFVQFLQN 180 NNVVDINNES GASFGWYDEP GSMAGPSHQF FQNNNLASTG FVAWGDSTSL FNPETAGAGF 240 GFNADSVSYM TLPSHFLPNN NLICNYNNNN NNAGLVTGFE YVSLVPETGA DYGFDFDSGY 300 AAGPCDQFLQ NNNLVSNNNN NRLGDYSILN PGDEGDGYFE LGSMAGPSEF LHNNNVYAGN 360 IACNGGSRTT GWEQQLVSAA AYDKNGSLKN LVGVNRLNKK TSRFRGVTKH RWSSRYEAHL 420 WDKSYARTDG QPGKRGRQGG YDKEEKAARA YDLAALKFWG LTAATNFPVS DYIKELNVMH 480 RMSRQQLITS LRRSSAAFSR GASMYRGVSR SNSRGHWQAR IARVTDERDL YLGSFDTEEE 540 AAEAYDIAAI KFRGPFVVTN FELSRYDLRA VAENPIPVGR EAKRMPIMQG SEGRGSTTGI 600 SGSNLVYPSL PSLPPSMIPR TSQMRSSADG GTPESMMETL ERRFPWL*

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

MDRGESRMIS LSSLTKTNEA AEYQHRFDTS SLSKYPQYPN KNGYEQENQQ AQYPEELIMS  60
APQPESSIKD PRAASNYELA PLPDQLDNFI ELPPMAFETQ QANLCMTDKT YKCALTADST  120
WYLFNSNNND NTGLENELAH AAGMHAMQPS PSPSTGSVTG SNSGFSPENG ADEFVQFLQN  180
NNVVDINNES GASFGWYDEP GSMAGPSHQF FQNNNLASTG FVAWGDSTSL FNPETAGAGF  240
GFNADSVSYM TLPSHFLPNN NLICNYNNNN NNAGLVTGFE YVSLVPETGA DYGFDFDSGY  300
AAGPCDQFLQ NNNLVSNNNN NRLGDYSILN PGDEGDGYFE LGSMAGPSEF LHNNNVYAGN  360
IACNGGSRTT GWEQQLVSAA AYDKNGSLKN LVGVNRLNKK TSRFRGVTKH RWSSRYEAHL  420
WDKSYARTDG QPGKRGRQGG YDKEEKAARA YDLAALKFWG LTAATNFPVS DYIKELNVMH  480
RMSRQQLITS LRRSSAAFSR GASMYRGVSR SNSRGHWQAR IARVTDERDL YLGSFDTEEE  540
AAEAYDIAAI KFRGPFVVTN FELSRYDLRA VAENPIPVGR EAKRMPIMQG SEGRGSTTGI  600
SGSNLVYPSL PSLPPSMIPR TSQMRSSADG GTPESMMETL ERRFPWL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	2e-61	AP2 family protein