PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0080s0023.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 198aa MW: 22528.6 Da PI: 8.0266

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0080s0023.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	91.5	4.1e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskR+ g++KKA+ELSvLCd++vav ifss+gk+yeyss Kaladp0080s0023.2.p 9 KRIEDKSSRQVTFSKRKSGLMKKANELSVLCDVDVAVFIFSSKGKMYEYSS 59 79***********************************************96 PP
2	K-box	20.2	2.5e-08	87	151	13	77
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqi 77 + ++++ e a L i+ ++ +R l ++L++ eL qL q+Le+ l++ R kK++ + e+ Kaladp0080s0023.2.p 87 TKQKCHAEDAGLSGSINLMRLINRSLDPTTDNPLNVPELTQLDQHLEDLLRHTRFKKEQAMWESA 151 45777888888888888888777888888889****************************98864 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MGRGKVELKR IEDKSSRQVT FSKRKSGLMK KANELSVLCD VDVAVFIFSS KGKMYEYSSG 60 SSLKRILEHH QSPFEAENAA RKHVLETKQK CHAEDAGLSG SINLMRLINR SLDPTTDNPL 120 NVPELTQLDQ HLEDLLRHTR FKKEQAMWES ALATVEEEGH SNQRLKHFQG DDEVRVLNEI 180 ESLNCANLKQ RIFCLHL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30260.1	3e-35	MIKC_MADS family protein