PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0080s0025.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 254aa MW: 26497.4 Da PI: 10.0245

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0080s0025.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	125.3	6.6e-39	24	119	2	100
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgka 90 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i ++tg+++ +as+ a++ +ss++ g+a Kaladp0080s0025.1.p 24 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSILAATGSGTVPASALaAAGAAVSSQG----GRA 109 789*************************************************************9999988865555555554....222 PP TCP 91 aksaakskks 100 + +a ++++ Kaladp0080s0025.1.p 110 SVAAGLQHQQ 119 2222211111 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGGTKPSDFH TAQKDVNNVV KKLAPKRSSN KDRHTKVEGR GRRIRMPALC AARIFQLTRE 60 LGHKSDGETI QWLLQQAEPS ILAATGSGTV PASALAAAGA AVSSQGGRAS VAAGLQHQQK 120 SNEPGGSGSG SGFGLGPSLW SHHHHHFGFP LTPPPPQSSS PSPPSASAAA SPESLNYLSK 180 LGLSGFDFTH ANPGQISFTS ILNGDQPLPG LELGLSQDAH NQHQPMSHIF HQMIHQQQEA 240 AVKDESGGSG QSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	9e-39	TCP family protein