PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0080s0028.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 647aa    MW: 71314.6 Da    PI: 6.2469
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0080s0028.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4471.3e-1362806451374
                 GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn..sseelaalklfsev 87 
                          lv+lLl+cAeav+++d   a+++L++l++ ++p gd+mqR+aa+fteAL+arla   +++ +++ ++++ ++    s e l+++++++++
  Kaladp0080s0028.1.p 280 LVHLLLACAEAVAKEDYMTARRYLQQLNQVVTPLGDSMQRVAACFTEALSARLAAaLTPKPSSSAASQPFNPFPpnSLEILKIYQILYQA 369
                          68****************************************************9656666655555555433244************** PP

                 GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                          +P++kf+h+taNqaI ea+e+e rvH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvgs    s e++ etg+ L+++A++l+vpfe
  Kaladp0080s0028.1.p 370 CPYIKFAHFTANQAIFEAFESEMRVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGS----SPEAVMETGRCLTELAHSLHVPFE 455
                          **************************************************************....9*********************** PP

                 GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                          f++ v ++ledl++++L+ + gEalaVn+v +lhr++  +++l +    +L ++++  P++v++veqea+hn++ Fl rfleal++ysa+
  Kaladp0080s0028.1.p 456 FHP-VGEQLEDLKPHMLNRRVGEALAVNSVNRLHRVP--PHCLGN----LLTMIREQAPNIVTIVEQEASHNGPYFLGRFLEALHCYSAI 538
                          ***.7*******************************9..888888....***************************************** PP

                 GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
                          fdsl+a++p++s +r+kvE+ ++++ei+n+vaceg er++rhe+lekWr+ +e  GFk+vpls++a++q k ll  ++ dgyr+ e++g+
  Kaladp0080s0028.1.p 539 FDSLDATFPQDSAQRAKVEQYIFAQEIKNIVACEGPERVMRHERLEKWRKIMEGRGFKEVPLSSNAVTQSKILLGLYSCDGYRLTEDKGC 628
                          ****************************************************************************************** PP

                 GRAS 358 lvlgWkdrpLvsvSaWr 374
                          l+lgW+dr+++++SaWr
  Kaladp0080s0028.1.p 629 LLLGWQDRAILAASAWR 645
                          ****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 647 aa     Download sequence    
MNSLRGSLSS LKSEGSSTNT KLQQHQQSFT ASLGELDKPV SSTDLDQTGS SLTLTPSSLN  60
LQGLRFDSGG EVEVQSPDWD SYFADHFDSS DFMISSPALL SPQLVSSYNS CAQGMLTTGC  120
SPPRFAPFGT NHQPKPKGMS PLHKVFNSPS SQFMHIESLT LPAIEEFLND DYSRHDLGAY  180
SLRNAGSSSA MLDHHHAMSM HHQPSRFGRG SCQGSGSTQM GIDQSDVYRM GSMSSCAGVP  240
LSQQLKQEDE QEQQLQHSLN HSLMGTMMAA DQEHDSGLQL VHLLLACAEA VAKEDYMTAR  300
RYLQQLNQVV TPLGDSMQRV AACFTEALSA RLAAALTPKP SSSAASQPFN PFPPNSLEIL  360
KIYQILYQAC PYIKFAHFTA NQAIFEAFES EMRVHVIDLD ILQGYQWPAF MQALAARPGG  420
APFLRITGVG SSPEAVMETG RCLTELAHSL HVPFEFHPVG EQLEDLKPHM LNRRVGEALA  480
VNSVNRLHRV PPHCLGNLLT MIREQAPNIV TIVEQEASHN GPYFLGRFLE ALHCYSAIFD  540
SLDATFPQDS AQRAKVEQYI FAQEIKNIVA CEGPERVMRH ERLEKWRKIM EGRGFKEVPL  600
SSNAVTQSKI LLGLYSCDGY RLTEDKGCLL LGWQDRAILA ASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-98GRAS family protein