PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0080s0087.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 438aa    MW: 48467.6 Da    PI: 4.9193
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0080s0087.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4002.4e-122664372374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                           +lLl+cAeavs+gdl+ a al+  l++++s +gdp+qRl ay++e+L+ar+  s+s++yk+l+++e +  +sse +++++++++++P+ 
  Kaladp0080s0087.1.p  66 NQLLLRCAEAVSEGDLSTAGALMDALEQIVSISGDPVQRLGAYMLEGLRARMETSGSGIYKSLRCTEPA--SSSEMMSYMQVLYQMCPYW 153
                          689***************************************************************998..59999************** PP

                 GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
                          kf++++aN aI eave e+r+H++Df+i qG QW+ L++aLa R++gpp  lR+Tgv++++s+  +   l+ +ge L+++A++++vpfef
  Kaladp0080s0087.1.p 154 KFAYVAANAAIQEAVEDEDRIHVVDFQIAQGSQWADLIKALAIRQRGPPhILRVTGVDDADSThaRGGGLRIVGETLSELAASCDVPFEF 243
                          *********************************************8888479*******9988889999********************* PP

                 GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
                          +   ++++  l  e+L + pgEa++ n+ + lh+++desv+++++rde+L++v++lsP+v+++veqe+++n++ F++rf e+l+yy+a+f
  Kaladp0080s0087.1.p 244 HQASMSDVRLL-RENLVLVPGEAMVFNFPYVLHHVPDESVNTDNYRDELLRMVQGLSPRVLTLVEQESNTNTSAFVHRFRETLDYYTAMF 332
                          **766677777.89**************************************************************************** PP

                 GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                          +s+++  +r++++r + E ++++++i +++ cegaer+erhe l+kWr+r++ aGF + pls  +a+ +k +l+ ++ + y++ee++g+l
  Kaladp0080s0087.1.p 333 ESIDVARARDDSQRLNAEMHCVAKDIISMIGCEGAERVERHELLAKWRARFSLAGFAQRPLSPAVADCVKDMLKDFHTN-YTLEEHKGAL 421
                          *****************************************************************************77.********** PP

                 GRAS 359 vlgWkdrpLvsvSaWr 374
                          +lgWk+r++v++SaWr
  Kaladp0080s0087.1.p 422 YLGWKNRAMVTCSAWR 437
                          ***************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MSSGSNEQFF TLESSFSPAN HLFTPYESPQ TAASVLSDTS PYSSQGSNYG GASSSSVPTR  60
NPLDINQLLL RCAEAVSEGD LSTAGALMDA LEQIVSISGD PVQRLGAYML EGLRARMETS  120
GSGIYKSLRC TEPASSSEMM SYMQVLYQMC PYWKFAYVAA NAAIQEAVED EDRIHVVDFQ  180
IAQGSQWADL IKALAIRQRG PPHILRVTGV DDADSTHARG GGLRIVGETL SELAASCDVP  240
FEFHQASMSD VRLLRENLVL VPGEAMVFNF PYVLHHVPDE SVNTDNYRDE LLRMVQGLSP  300
RVLTLVEQES NTNTSAFVHR FRETLDYYTA MFESIDVARA RDDSQRLNAE MHCVAKDIIS  360
MIGCEGAERV ERHELLAKWR ARFSLAGFAQ RPLSPAVADC VKDMLKDFHT NYTLEEHKGA  420
LYLGWKNRAM VTCSAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.11e-174GRAS family protein