PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0080s0113.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26435.1 Da    PI: 9.8594
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0080s0113.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.75.5e-271059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         ri+n++ rqvtfskRrng+lKKA+EL +LCdaev v++fsstgkly+++s
  Kaladp0080s0113.1.p 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVMVFSSTGKLYDFAS 59
                         8***********************************************86 PP
2K-box87.62.4e-2978170898
                K-box   8 s..leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                          +  +++++ + +q+e++ L++++++Lq+++R+l+G+dL+ L +k+Lq+Le+qLeksl++iR++K++ll+++i+el +k + +++en +L 
  Kaladp0080s0113.1.p  78 QlmNSSSEIKFWQREANMLRQQLQSLQETHRQLMGDDLSGLGIKDLQNLENQLEKSLRSIRTTKDQLLIDEIQELNRKGNIIHQENLELY 167
                          13468899*********************************************************************************9 PP

                K-box  96 kkl 98 
                          +k+
  Kaladp0080s0113.1.p 168 QKV 170
                          996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGKVVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGVMVFSS TGKLYDFAST  60
SMKSVIDRYN KSKEDQHQLM NSSSEIKFWQ REANMLRQQL QSLQETHRQL MGDDLSGLGI  120
KDLQNLENQL EKSLRSIRTT KDQLLIDEIQ ELNRKGNIIH QENLELYQKV YVTRYAHQTN  180
GMNRTPVIRY DLDEAHVPVN LQLCQPQPQH QNYETPTRAA NLGRLHLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.14e-99MIKC_MADS family protein