PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0080s0141.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 403aa MW: 45372.5 Da PI: 6.686

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0080s0141.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.2	3.5e-12	87	143	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g Kaladp0080s0141.1.p 87 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 143 57*****************99998898888888******************98 PP
2	AP2	51	3.6e-16	186	237	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g Kaladp0080s0141.1.p 186 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 237 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 403 aa Download sequence
MAASPPPLPD LLAFISAPLR IISLIIVEIA LKDLHSSFPF QHSSMAKLSQ QNQTNNNNAN 60 SNNLNGVTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR YEAHLWDKNC WNESQNKKGR 120 QGAYDDEEAA AHAYDLAALK YWGADTILNF PLATYDKEMK EMEDQSREEY IGSLRRKSSG 180 FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAATAYDM AAIEYRGLNA 240 VTNFDLSRYI KWLRPNHTAD TSSNIIARPN PSTPSSINTN SNLITADAPN PSPEFGFNSN 300 FTVPTPQTTR SSNTASSALG LLLQSSKFKE MMEMSLTADS PMTDESDMPK GRFPDEIQTY 360 FESYDDSNGY EGGEEFMFGE FNSMVAPMFQ CEFEDEIKHL VT*

Sequence ? help Back to Top

Protein Sequence Length: 403 aa Download sequence

MAASPPPLPD LLAFISAPLR IISLIIVEIA LKDLHSSFPF QHSSMAKLSQ QNQTNNNNAN  60
SNNLNGVTKV KRTRRSVPRD SPPQRSSIYR GVTRHRWTGR YEAHLWDKNC WNESQNKKGR  120
QGAYDDEEAA AHAYDLAALK YWGADTILNF PLATYDKEMK EMEDQSREEY IGSLRRKSSG  180
FSRGVSKYRG VARHHHNGRW EARIGRVFGN KYLYLGTYAT QEEAATAYDM AAIEYRGLNA  240
VTNFDLSRYI KWLRPNHTAD TSSNIIARPN PSTPSSINTN SNLITADAPN PSPEFGFNSN  300
FTVPTPQTTR SSNTASSALG LLLQSSKFKE MMEMSLTADS PMTDESDMPK GRFPDEIQTY  360
FESYDDSNGY EGGEEFMFGE FNSMVAPMFQ CEFEDEIKHL VT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	4e-92	AP2 family protein