PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0257.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 838aa    MW: 91664.3 Da    PI: 6.143
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0257.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.2e-192583357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+eeLe++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0081s0257.2.p 25 KYVRYTAEQVEELERVYAETPKPSSLRRQQLVRECpilaNIEPKQIKVWFQNRRCREKQ 83
                         56789****************************************************97 PP
2START143.12.8e-451643692204
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W +++++ e+   + +   g
  Kaladp0081s0257.2.p 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFTISESSSGVAARACGLVGLEPP-KIAEILKDRLSWFRDCRSLEVFTSLPTPngG 252
                          68999*****************************************************.8888888888***********999976556* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXX CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgrlp 177
                           ++l ++++ a++ l+p Rd +++Ry+  l+ g++v++++S++ ++  p+   ++vRae+lpSg+li+++++g+s +++v+h +l++ ++
  Kaladp0081s0257.2.p 253 SIELLYSQMFAPTILAPaRDLWTLRYTTLLENGSLVVCERSLSGTRAAPNaGGNFVRAEMLPSGYLIRSCDGGGSIIHIVDHLNLEALSV 342
                          *************************************************9999************************************* PP

                          HHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                START 178 hwllrslvksglaegaktwvatlqrqc 204
                          +++lr+l+ s+   ++k++ a+l++ +
  Kaladp0081s0257.2.p 343 PEVLRPLYTSSKLVAQKMTIAALRYAR 369
                          ***********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MAMVVSQRRE NSGGSINKHL DASGKYVRYT AEQVEELERV YAETPKPSSL RRQQLVRECP  60
ILANIEPKQI KVWFQNRRCR EKQRNESSRL QTVNHKLTAM NKLLMEENDR LQKQVSHLVY  120
ENGYIRQQLQ SANGAVADGS CESVVTTPRQ SLRDATNPAG LLAIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFT ISESSSGVAA RACGLVGLEP PKIAEILKDR LSWFRDCRSL  240
EVFTSLPTPN GGSIELLYSQ MFAPTILAPA RDLWTLRYTT LLENGSLVVC ERSLSGTRAA  300
PNAGGNFVRA EMLPSGYLIR SCDGGGSIIH IVDHLNLEAL SVPEVLRPLY TSSKLVAQKM  360
TIAALRYARQ VAHETSGEEV YSLGRQPAVL RTFSQRLSRG FNDAVNGFSD AGWSVMSGDG  420
ADDVIISVNS TRNLNSPSSA NNPFPVFGGI LCAKASMLLR NVPSGVLVRF LREHRSEWAD  480
YNVDAYSAAS IKSNSFAFPG MRPASFSSSQ IIMPLGQTIE NEETLEVIRI EGHSLSPEDA  540
YMSRDIHLLQ ICSGTEEYST GACAELIFAP INEMFPDDVP LLPSGFRIIP LDTKSAADIP  600
DQLKAHRTLD LTSSLEVSQV TSQAPCGDTR SVLTIAFQFP FENNLQDSVA TMARQYVRSV  660
ITSVQRVATA ITPTGLFPNE GPKISSDTPE ALTLAQWICY SYSYHIGADL LRAGALAGDR  720
VLKHLWHHPD AILCCSIKAT PVLIFANQAG LDMLETTLAA LQDVSLDKIF DESGRKALCS  780
DFAKIMQQGF AYLPAGICVS TMGRDVSYSQ SVAWKVLAGD DQTVHCLSFS FVNWSFM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein