PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0081s0319.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARR-B
Protein Properties Length: 600aa    MW: 65538.5 Da    PI: 6.6307
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0081s0319.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.33.6e-28201254155
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          kpr++W+ eLH++Fv av++L G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  Kaladp0081s0319.1.p 201 KPRVVWSIELHRKFVAAVNHL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 254
                          79*******************.********************************8 PP
2Myb_DNA-binding34.64.4e-11203253148
                          TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                          r  W+ e++ ++v av+ lG +   +k+I + m+ +++t++++ s++qky+
  Kaladp0081s0319.1.p 203 RVVWSIELHRKFVAAVNHLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 253
                          678********************************99*************7 PP
3Response_reg71.63.2e-24201261107
                          EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHH CS
         Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedale 88 
                          vl vdD+p+ + ll+ +l+k +y +v++ +++ +al+ll++ +  +Dl++ D+ mp+mdG++ll++   e   lp+i+++a+g+++++ +
  Kaladp0081s0319.1.p  20 VLAVDDDPTCLLLLEGLLRKCKY-HVTTRTHAIAALNLLRDDNnrFDLVISDVHMPDMDGFKLLEQVGLEM-GLPVIMLSAYGDPKLVMK 107
                          799********************.***************777667**********************6644.8***************** PP

                          HHHTTESEEEESS--HHHH CS
         Response_reg  89 alkaGakdflsKpfdpeel 107
                           +  Ga d+l Kp+ +eel
  Kaladp0081s0319.1.p 108 GITHGACDYLLKPVRIEEL 126
                          *****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MTIEQRIEEP ADQFPVGMRV LAVDDDPTCL LLLEGLLRKC KYHVTTRTHA IAALNLLRDD  60
NNRFDLVISD VHMPDMDGFK LLEQVGLEMG LPVIMLSAYG DPKLVMKGIT HGACDYLLKP  120
VRIEELQIIW QHVIRKKRVD PKDHKSADNT HYGNTEAGQA GAGNGYPDQK SNKKRKDQVE  180
DEDEDHDDNE LENDDPSAQK KPRVVWSIEL HRKFVAAVNH LGIDKAVPKR ILELMNVEKL  240
TRENVASHLQ KYRLYLRRIS CVQSQQANMA AAFGTTDPAS YLRVNGMGGF NSLSGSPQFQ  300
NSAAFRSFQP NGMLGRLNSP ASLGGIQRLP SQFSGFSEQG VTLIPGNSTG CILKGMPMPM  360
PTSFELDQLQ DSNNRNATAK VDDLAVFPVT SGLPDVKKTA AGGLSGPHLP PPTSTLMLEG  420
HPVQSHSRVG IGNQSAAVFG SLTPDLSSHF SDRARGSDNW PVAIQSSTGH SDSYASYSGP  480
QHVNSHLDDG ASVTELPLSV TDYQYGSHSD IKPTWDSFAT AAAPIYSSSH STTVAYTNLR  540
RVTNARSEFH AIEANYTVEN SATSAPSANF KRGYPNKPQT YQLPNSVGSL EDLVSSMMK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135176RKKRVDPKDHKSADNTHYGNTEAGQAGAGNGYPDQKSNKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-127ARR-B family protein