PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0082s0062.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MIKC_MADS

Protein Properties

Length: 191aa MW: 22014.6 Da PI: 7.969

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0082s0062.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80	1.6e-25	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri n +nr vtfskRr gi KKA+E+ vLCda+v++i+f+s+gk++ey+s Kaladp0082s0062.2.p 9 KRIANATNRMVTFSKRRCGITKKAKEITVLCDAKVSLIVFASNGKMHEYCS 59 79***********************************************96 PP
2	K-box	73.4	6.4e-25	71	160	1	90
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 yq++sgk+l+eak+e+l++e++++kke++n+q e+Rhl Ged++ L++ +L+++e+ Le +l+++R+k +++++++ +++++ e+e++e Kaladp0082s0062.2.p 71 YQNQSGKRLWEAKHENLSNEIDRIKKENDNMQIELRHLRGEDIGALDIPQLMEMEDMLEMGLTNVREKMMDIYKMKKRNTRMLEEETSEL 160 899**********************************************************************************99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MGRGKIEIKR IANATNRMVT FSKRRCGITK KAKEITVLCD AKVSLIVFAS NGKMHEYCSH 60 NSSLSDILDI YQNQSGKRLW EAKHENLSNE IDRIKKENDN MQIELRHLRG EDIGALDIPQ 120 LMEMEDMLEM GLTNVREKMM DIYKMKKRNT RMLEEETSEL SYSVVNPAYM LISLISETYI 180 HSFMVLITCV *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G20240.1	9e-67	MIKC_MADS family protein