PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0083s0049.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 350aa    MW: 38788.3 Da    PI: 4.3836
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0083s0049.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.72.2e-111055550
                         SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
               SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                         ++s+++v fsk   ++ K  +EL +LCd+++++i+  ++++ y+++
  Kaladp0083s0049.1.p 10 DNSKKTVDFSKKASTLNKQIYELTTLCDVDACLILRTPHNQTYTWP 55
                         67899****************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MKQLGHHNAD NSKKTVDFSK KASTLNKQIY ELTTLCDVDA CLILRTPHNQ TYTWPESADQ  60
VRRVVGLFKS KAGTTTGKIA RDVTSDERRL KDMPTAQAED LLKRLEERIE ALTAKIANAE  120
VGNDITKIGS NPDETLRGEI MKRFSFQEKL KELTAGQAMS LSSELDAKIE ALTTKIDNGE  180
GRHAKSIIAG NNDKGMNPAV DMDCSADNDD SWTTRGYYEY EEYNAAASDA HMDDALALQP  240
TTTTSTCWVE LESDFLIDSM VPNPWFETSD MRSLCYGSME MEPSSAPPVV DSQKESSAAE  300
TIFDDLGPIL TDTTMRTMSF WDGCLEVDGE TQLQQQQPLS PIQNHLLFT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31630.17e-09M-type_MADS family protein